Plasma samples from 47 patients with stages 1– 4 chronic kidney disease were analyzed with liquid chromatography-mass spectrometry to identify early biomarkers of the disease’s progression through metabolic pathway analysis.
In a recent study published in the Journal of Inflammation Research (1), plasma samples from 47 patients with stages 1– 4 chronic kidney disease (CKD) not requiring dialysis (as well as 30 healthy controls) were analyzed with liquid chromatography-mass spectrometry (LC-MS) to investigate the changes of different metabolites in the body fluids of non-dialysis patients with CKD using a metabolomics approach. The goal of this study was to identify early biomarkers of CKD progression through metabolic pathway analysis.
CKD is a prevalent condition in the general population, and it has become a significant global public health concern, with the estimated global prevalence of CKD ranging from 10.6% to 13.4% (2). In the early stages of the disease, the symptoms may not be obvious, and therefore can be easily overlooked. The progression of CKD towards end-stage renal disease (ESRD), however, is unfortunately associated with high costs, mortality, and a significant decline in a patient’s quality of life, particularly when dialysis treatment is introduced. The plasma biochemical marker of glomerular filtration rate (GFR), plasma creatinine concentration (sCr), though widely used, is often considered insensitive for detecting early stages of CKD. Therefore, the early recognition of CKD is crucial in slowing down disease progression, reducing morbidity, and improving survival.
Metabolomics, a systematic analysis of metabolites in a biological specimen, is focused on the dynamic changes, interactions, and responses of metabolites in various metabolic pathways, and has become a commonly used approach in systems biology research, especially in the identification of new diagnostic and prognostic biomarkers for human diseases (3,4).
While the authors of the study state that LC-MS is a powerful tool that enables accurate identification and quantification of compounds due to its greater sensitivity and specificity, the technique’s current utilization is primarily involved with the uncovering of the complexity of plasma metabolome and the provision of various biomedical applications based on the obtained results. The primary objective of their study, then, was to assess plasma metabolic status in non-dialysis patients with early CKD compared with controls using LC-MS.
Plasma samples from CKD patients and controls were successfully differentiated using an orthogonal least squares discriminant analysis model (OPLS-DA) model. Twenty-five compounds were initially identified as potential plasma metabolic markers for distinguishing CKD patients from healthy controls. Among these, six compounds (ADMA, D-ornithine, kynurenine, kynurenic acid, 5-hydroxyindoleacetic acid, and gluconic acid) were found to be associated with CKD progression. Changes in metabolic pathways associated with CKD progression include arginine and ornithine metabolism, tryptophan metabolism, and the pentose phosphate pathway.
By analyzing the metabolic pathways of different metabolites, the researchers have identified the significant impact of CKD progression. The main metabolic pathways involved are arginine and ornithine metabolism, tryptophan metabolism, and pentose phosphate pathway. ADMA, D-ornithine, L-kynurenine, kynurenic acid, 5-hydroxyindoleacetic acid, and gluconic acid could serve as potential early biomarkers for CKD progression. The researchers said that their findings offer the possibility of early CKD detection in patients, and the exploration of intervention utilizing common clinical drugs targeting these metabolic pathways and metabolites offer promise for the treatment of the disease.
References
1. Hong, H.; Zhou, S.; Zheng, J.; Shi, H.; Chen, Y.; Li, M. Metabolic Assessment in Non-Dialysis Patients with Chronic Kidney Disease. J. Inflamm. Res. 2024, 17, 5521–5531. DOI: 10.2147/JIR.S461621
2. Hill, N. R.; Fatoba, S. T.; Oke, J. L. Global Prevalence of Chronic Kidney Disease – A Systematic Review and Meta-Analysis. PLoS One 2016, 11 (7), e0158765. DOI:10.1371/journal.pone.0158765
3. Levey, A. S.; Stevens, L. A.; Schmid, C. H. et al. A New Equation to Estimate Glomerular Filtration Rate. Ann. Intern Med. 2009, 150, 604. DOI: 10.7326/0003-4819-150-9-200905050-00006
4. Zhang, Z. H.; Chen, H.; Vaziri, N.D. et al. Metabolomic Signatures of Chronic Kidney Disease of Diverse Etiologies in the Rats and Humans. J Proteome Res. 2016;15(10):3802–3812. DOI:10.1021/acs.jproteome.6b00583
New Study Uses MSPE with GC–MS to Analyze PFCAs in Water
January 20th 2025Scientists from the China University of Sciences combined magnetic solid-phase extraction (MSPE) with gas chromatography–mass spectrometry (GC–MS) to analyze perfluoro carboxylic acids (PFCAs) in different water environments.
The Next Frontier for Mass Spectrometry: Maximizing Ion Utilization
January 20th 2025In this podcast, Daniel DeBord, CTO of MOBILion Systems, describes a new high resolution mass spectrometry approach that promises to increase speed and sensitivity in omics applications. MOBILion recently introduced the PAMAF mode of operation, which stands for parallel accumulation with mobility aligned fragmentation. It substantially increases the fraction of ion used for mass spectrometry analysis by replacing the functionality of the quadrupole with high resolution ion mobility. Listen to learn more about this exciting new development.
A Guide To Finding the Ideal Syringe and Needle
January 20th 2025Hamilton has produced a series of reference guides to assist science professionals in finding the best-suited products and configurations for their applications. The Syringe and Needle Reference Guide provides detailed information on Hamilton Company’s full portfolio of syringes and needles. Everything from cleaning and preventative maintenance to individual part numbers are available for review. It also includes selection charts to help you choose between syringe terminations like cemented needles and luer tips.
The Complexity of Oligonucleotide Separations
January 9th 2025Peter Pellegrinelli, Applications Specialist at Advanced Materials Technology (AMT) explains the complexity of oligonucleotide separations due to the unique chemical properties of these molecules. Issues such as varying length, sequence complexity, and hydrophilic-hydrophobic characteristics make efficient separations difficult. Separation scientists are addressing these challenges by modifying mobile phase compositions, using varying ion-pairing reagents, and exploring alternative separation modes like HILIC and ion-exchange chromatography. Due to these complexities, AMT has introduced the HALO® OLIGO column, which offers high-resolution, fast separations through its innovative Fused-Core® technology and high pH stability. Alongside explaining the new column, Peter looks to the future of these separations and what is next to come.
Oasis or Sand Dune? Isolation of Psychedelic Compounds
January 20th 2025Magic mushrooms, once taboo, have recently experienced a renaissance. This new awakening is partially due to new findings that indicate the effects of psilocybin, and its dephosphorylated cousin psilocin may produce long lasting results for patients who might be struggling with anxiety, depression, alcohol and drug abuse, and post-traumatic stress disorder. Hamilton Company has developed a methodology for the isolation and identification of 5 common psychedelic compounds used in the potential treatment of disease. The PRP-1 HPLC column resin remains stable in the harsh alkaline conditions ideal for better separations.